I have the same problem with JD freezing after the last updates. I have an iMac late 2013 with MacOS X 10.8.5. Until then it worked without any problem even after the recent Java 1.6 update by Apple. So I think the problem is with JD, not Java.
I solved the issue by installing JD 2 beta. It works quite well on Java 1.7. I hope the final version of JD 2 will be released soon as it represents a huge improvement.
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